에이아이클라우드 플랫폼

3D Conformer Generation

Generate 3D structures for peptide sequences using RDKit ETKDG or Modeller

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Input Sequence

Peptide Sequence *

Enter sequence in single-letter amino acid codes. Maximum length: 50 residues.

Length: 0 residues

Generation Method *

RDKit ETKDG

Fast conformer generation using experimental torsion angles

Fast Reliable No License

Best for: Any sequence
Time: ~2-10 seconds
Improved retry logic

Modeller + PSIPRED Fallback

Attempts official Modeller, falls back to enhanced RDKit

Fallback License Required*

Uses SS prediction
Not official PepFun Modeller
Falls back to RDKit if no license

Example Sequences

About This Tool

RDKit ETKDG (Recommended)

Uses experimental torsion angle knowledge
Multiple retry attempts with different seeds
Optimized force field minimization
No license required

Modeller Fallback

Attempts official PepFun Modeller if available
Falls back to enhanced RDKit if not licensed
Includes basic SS prediction
Requires Modeller license for full features