🧬 pLM4CPPs

Predict Cell-Penetrating Peptides using Protein Language Models. Input up to 1,000 peptide sequences.

Predict CPP Activity
0 / 1,000 sequences
Excel/CSV should have a column named "sequence". FASTA format is also supported.
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Model Selection

Choose a protein language model for embedding generation and prediction.

About the Models

ESM2-320: Best balance of speed and accuracy (89.6% ACC) ✓ AVAILABLE
ESM2-480: Medium speed, good accuracy (~90% ACC) ✓ AVAILABLE
ESM2-640: Medium speed, good accuracy (~90% ACC) ✓ AVAILABLE

Note: Other models require additional pre-trained files

What are CPPs?

Cell-Penetrating Peptides (CPPs) are short peptides (5-50 amino acids) capable of crossing cell membranes. They are valuable for:

  • Drug delivery systems
  • Gene therapy applications
  • Intracellular targeting
  • Therapeutic molecule transport

Reference: Kumar et al., J. Chem. Inf. Model. 2025